|
|
M. Oğuzhan Külekci, Ph.D. "Entities must not be multiplied beyond necessity." --William of Ockham |
||
You may find my publications below. Note that the
downloadable files provided in this site are only for
personal research and educational purposes.
My co-authors: Jeffrey
Scott Vitter (4), Bojian Xu (4), Kemal Oflazer (3), Mehmed
Özkan (1), Wing-Kai
Hon (1), Rahul
Shah (1), Hüseyin Demirci (1), Mahmut Ş. Sağıroğlu (1)
|
Refereeed Journal Publications |
|
|
COSE |
M. Oğuzhan Külekci, On Scrambling the Burrows--Wheeler Transform to Provide Privacy in Lossless Compression, Computers&Security, accepted, pdf |
|
TJEECS |
Huseyin Demirci, M. Samil
Sagiroglu, M. Oğuzhan Külekci, A time--memory trade-off approach for
the solution of non--linear equation systems, Turkish
Journal of Electrical Engineering and Computer Sciences (accepted)
|
|
TCBB |
M. Oğuzhan Külekci,
Jeffrey Scott Vitter, Bojian Xu, Efficient maximal repeat finding using
the Burrows--Wheeler transform and wavelet tree, submitted to IEEE/ACM
Transactions on Computational Biology and Bioinformatics accepted |
|
BMC-Genomics |
M. Oğuzhan Külekci,
Wing-Kai Hon, Rahul Shah, Jeffrey Scott Vitter, Bojian Xu, PSI-RA: A
parallel sparse index for genomic read alignment, BMC Genomics, first
published online July 27,2011 |
|
CMPJ |
M. Oğuzhan Külekci, Jeffrey Scott Vitter, Bojian Xu, Fast pattern matching via k-bit filtering based text decomposition, The Computer Journal, first published online December 20,2010 (.pdf) |
|
MCS'10 |
M. Oğuzhan Külekci, BLIM: A new bit-parallel pattern matching algorithm overcoming computer word size limitation, Mathematics in Computer Science, volume 3, number 4, pages 407–420, 2010 (.pdf, bibtex) |
|
Refereed Conference Publications |
|
|
CCP'11 |
M. Oğuzhan Külekci, A
method to ensure the confidentiality of the compressed data, to apear in
Proceedings of International conference on Data Compression, Communication,
and Processing, Palinuro,Italy, June 21-24 (.pdf, slides) |
|
DCC'11 |
M. Oğuzhan Külekci, Compressed
Context Modeling, Proceedings of IEEE Data Compression Conference, Snow
Bird, UT, USA, March 29-31, 2011 (.pdf, slides) |
|
BIBM'10 |
M. Oğuzhan Külekci, Jeffrey Scott Vitter, Bojian Xu, Time and space efficient maximal repeat finding using Burrows–Wheeler transform and wavelet trees, Proceedings of IEEE International Conference on Bioinformatics & Biomedicine, Hong Kong, December, 2010 (.pdf, bibtex) |
|
BIBM'10 |
M. Oğuzhan Külekci, Wing-Kai Hon, Rahul Shah, Jeffrey Scott Vitter, Bojian Xu, PSI-RA: A parallel sparse index for read alignment on genomes, Proceedings of IEEE International Conference on Bioinformatics&Biomedicine, Hong Kong, December, 2010 (.pdf, bibtex, slides) |
|
ISCIS'10 |
M. Oğuzhan Külekci, Jeffrey Scott Vitter, Bojian Xu, Boosting pattern matching performance via k-bit filtering, Proceedings of 25th International Symposium on Computer and Information Sciences, Lecture Notes in Electrical Engineering, volume62, pages 27–33, London, UK, September, 2010 (.pdf, slides, bibtex) |
|
PSC'09 |
M. Oğuzhan Külekci, Filter based fast matching of long patterns by using SIMD instructions, Proceedings of Prague Stringology Conference, pages 118–129, Prague, Czech Republic, August, 2009 (.pdf, slides, bibtex) (according to a recent study, the SSEF algorithm has been evaluated in the best 11 exact pattern matching algorithms.) |
|
ISAAC'08 |
M. Oğuzhan Külekci, A method to overcome computer word size limitation in bit-parallel pattern matching, Proceedings of 19th International Symposium on Algorithms and Computation, Lecture Notes in Computer Science, volume 5369, pages 496–506, Gold Coast, Australia, December, 2008 (.pdf, bibtex) |
|
ISCIS'07 |
M. Oğuzhan Külekci, TARA: An algorithm for searching multiple patterns on text files, Proceedings of 22nd International Symposium on Computer and Information Sciences, Ankara, Turkey, November, 2007, Honoured by best paper award on data management track (.pdf, bibtex) |
|
ICDMKE'07 |
M. Oğuzhan Külekci, An empirical analysis of pattern scan order in pattern matching, Proceedings of International Conference on Data Mining and Knowledge Engineering, volume I, pages 337–342, London, UK, July, 2007 (.pdf, bibtex) |
|
TAINN'06 |
M. Oğuzhan Külekci, Kemal Oflazer, An infrastructure for Turkish prosody generation in text-to-speech synthesis, Proceedings of 15th Turkish Symposium on Artificial Intelligence and Neural Networks, pages 49–57, Akyaka, Mugla, Turkey,June, 2006 (.pdf, bibtex) |
|
ISCIS'05 |
M. Oğuzhan Külekci, Kemal Oflazer, Pronunciation disambiguation in Turkish, Proceedings of 20th International Symposium on Computer and Information Sciences, Lecture Notes in Computer Science, pages 636–645, volume 3733, Istanbul, Turkey,October, 2005 (.pdf, bibtex) |
|
SIU'04 |
M. Oğuzhan Külekci, Kemal Oflazer, Yazıdan konuşma üretmede kullanılan dogal dil işleme tekniklerine genel bir bakış (An overview of NLP techniques used in TTS synthesis), Proceedings of Signal Processing Applications, Kuşadası, Turkey, April, 2004 (.pdf, bibtex) |
|
EuroSpeech'01 |
M. Oğuzhan Külekci, Mehmed Özkan, Turkish word segmentation using morphological analyzer, Proceedings of 7th European Conference on Speech Communication and Technology, Aalborg, Denmark, September, 2001(.pdf, bibtex) |
|
Talks |
|
|
Özyeğin University |
M. Oğuzhan Külekci, New insights in context modeling for text
compression, Özyeğin University, İstanbul, October, 2011 (slides) |
|
LSD&LAW'11 |
M. Oğuzhan Külekci, Compressed
context modeling, London Stringology Days & London Algorithmic
Workshop, King’s College, London, UK, February, 2011 |
|
LSD&LAW'11 |
M. Oğuzhan Külekci, Privacy
preserving text-indexing, London Stringology Days & London
Algorithmic Workshop, King’s College, London, UK, February, 2011 |
|
Boğaziçi University'10 |
M. Oğuzhan
Külekci, How to build compact text indexes?, Seminar given
at Department of Computer Engineering, Boğaziçi University,
Istanbul, Turkey, 8 October 2010 (.pdf) |
|
LSD&LAW'09 |
M. Oguzhan Külekci, Overcoming computer word size limitation in bit–parallel pattern matching, London Stringology Days & London Algorithmic Workshop, King’s College, London, UK, February, 2009 (slides) |
|
NATO-IST'01 |
M. Oguzhan Külekci, Mehmed Özkan, Fast morphological analysis of agglutinative languages -application on Turkish, Talk given in NATO-IST Meeting (presented by M. Özkan ), Paris, France, March, 2001 (slides) |
|
Dissertation and Thesis |
|
|
Dissertation |
Statistical morphological disambiguation with application to disambiguation of pronunciations in Turkish, Sabancı University, Department of Computer Science & Engineering, Advisor: Prof. Kemal Oflazer, Istanbul, Turkey, July, 2006 (.pdf, bibtex) |
|
Thesis |
An intelligent diagnostic system from the clinical narratives in Turkish, Bogaziçi University, Institute of Biomedical Engineering, Advisor: Prof. Mehmed Özkan, Istanbul, Turkey, June, 2000 (.pdf, bibtex) |